recipe ephemeris

Ephemeris is an opinionated library and set of scripts for managing the bootstrapping of Galaxy project plugins - tools, index data, and workflows.

Homepage:

https://github.com/galaxyproject/ephemeris

Documentation:

https://ephemeris.readthedocs.io/en/latest/

License:

OTHER / Academic Free License (AFL)

Recipe:

/ephemeris/meta.yaml

package ephemeris

(downloads) docker_ephemeris

versions:
0.10.10-0,  0.10.9-0,  0.10.8-0,  0.10.7-0,  0.10.6-2,  0.10.6-1,  0.10.6-0,  0.10.5-0,  0.10.4-0, 

0.10.10-0,  0.10.9-0,  0.10.8-0,  0.10.7-0,  0.10.6-2,  0.10.6-1,  0.10.6-0,  0.10.5-0,  0.10.4-0,  0.10.2-0,  0.10.0-0,  0.9.0-0,  0.8.0-2,  0.8.0-0

depends bioblend:

>=0.10.0

depends galaxy-tool-util:

>=20.9.1

depends galaxy-util:

>=20.9.0

depends jinja2:

depends pysam:

depends python:

>=3.7

depends pyyaml:

depends rich:

depends six:

>=1.9.0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ephemeris

and update with::

   mamba update ephemeris

To create a new environment, run:

mamba create --name myenvname ephemeris

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ephemeris:<tag>

(see `ephemeris/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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