recipe epic

Chip-Seq broad peak/domain finder.

Homepage

http://github.com/endrebak/epic

License

GNU General Public License v3 (GPLv3)

Recipe

/epic/meta.yaml

package epic

(downloads) docker_epic

Versions

0.2.12-1, 0.2.12-0, 0.2.9-1, 0.2.9-0, 0.2.8-0, 0.2.7-0, 0.2.5-0, 0.2.4-0, 0.2.2-0, 0.2.1-0, 0.2.0-0, 0.1.28-0, 0.1.27-0, 0.1.26-0, 0.1.25-0, 0.1.24-0, 0.1.20-0, 0.1.17-0

Depends bedtools

Depends cython

Depends docopt

Depends functools32

Depends joblib

Depends natsort

Depends numpy

Depends pandas

Depends pybigwig

Depends pyfaidx

Depends python

>=2.7,<2.8.0a0

Depends scipy

Depends typing

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install epic

and update with:

conda update epic

or use the docker container:

docker pull quay.io/biocontainers/epic:<tag>

(see epic/tags for valid values for <tag>)