recipe esme

Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.

Homepage:

https://github.com/j34ni/bioconda-recipes

License:

BSD / BSD-3-Clause

Recipe:

/esme/meta.yaml

ESME (Earth System Modelling Environment) is a package designed to facilitate the installation and management of various scientific computing libraries with support for multiple MPI implementations (namely MPIch, OpenMPI, MVAPIch and ParaStationMPI). This bundle currently includes: - PnetCDF: Version 1.14.0 - HDF5: Version 1.14.5 - netCDF_C: Version 4.9.2 - netCDF_Fortran: Version 4.6.1 - ParallelIO: Version 2.6.2 - ESMF: Version 8.8.0 - OSU_Micro_Benchmarks: Version 7.5

package esme__

(downloads) docker_esme__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme__

and update with::

   mamba update esme__

To create a new environment, run:

mamba create --name myenvname esme__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme__:<tag>

(see `esme__/tags`_ for valid values for ``<tag>``)
package esme_esmf__

(downloads) docker_esme_esmf__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_esmf__

and update with::

   mamba update esme_esmf__

To create a new environment, run:

mamba create --name myenvname esme_esmf__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_esmf__:<tag>

(see `esme_esmf__/tags`_ for valid values for ``<tag>``)
package esme_hdf5__

(downloads) docker_esme_hdf5__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_hdf5__

and update with::

   mamba update esme_hdf5__

To create a new environment, run:

mamba create --name myenvname esme_hdf5__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_hdf5__:<tag>

(see `esme_hdf5__/tags`_ for valid values for ``<tag>``)
package esme_netcdf-c__

(downloads) docker_esme_netcdf-c__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_netcdf-c__

and update with::

   mamba update esme_netcdf-c__

To create a new environment, run:

mamba create --name myenvname esme_netcdf-c__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_netcdf-c__:<tag>

(see `esme_netcdf-c__/tags`_ for valid values for ``<tag>``)
package esme_netcdf-fortran__

(downloads) docker_esme_netcdf-fortran__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_netcdf-fortran__

and update with::

   mamba update esme_netcdf-fortran__

To create a new environment, run:

mamba create --name myenvname esme_netcdf-fortran__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_netcdf-fortran__:<tag>

(see `esme_netcdf-fortran__/tags`_ for valid values for ``<tag>``)
package esme_omb__

(downloads) docker_esme_omb__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_omb__

and update with::

   mamba update esme_omb__

To create a new environment, run:

mamba create --name myenvname esme_omb__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_omb__:<tag>

(see `esme_omb__/tags`_ for valid values for ``<tag>``)
package esme_pio__

(downloads) docker_esme_pio__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_pio__

and update with::

   mamba update esme_pio__

To create a new environment, run:

mamba create --name myenvname esme_pio__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_pio__:<tag>

(see `esme_pio__/tags`_ for valid values for ``<tag>``)
package esme_pnetcdf__

(downloads) docker_esme_pnetcdf__

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_pnetcdf__

and update with::

   mamba update esme_pnetcdf__

To create a new environment, run:

mamba create --name myenvname esme_pnetcdf__

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_pnetcdf__:<tag>

(see `esme_pnetcdf__/tags`_ for valid values for ``<tag>``)

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