recipe ezaai

EzAAI is a suite of workflows for improved AAI calculation performance along with the novel module that provides hierarchical clustering analysis and dendrogram representation.

Homepage:

http://leb.snu.ac.kr/ezaai

Developer docs:

https://github.com/endixk/ezaai

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/ezaai/meta.yaml

Links:

doi: 10.1007/s12275-021-1154-0

package ezaai

(downloads) docker_ezaai

versions:

1.2.3-0,  1.2.2-0

depends blast:

depends diamond:

depends mmseqs2:

depends openjdk:

>=8,<9

depends prodigal:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ezaai

and update with::

   mamba update ezaai

To create a new environment, run:

mamba create --name myenvname ezaai

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ezaai:<tag>

(see `ezaai/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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