recipe fast5seek

Get paths for fast5 files contained in BAM, SAM, or fastq.

Homepage:

https://github.com/mbhall88/fast5seek

License:

MIT / MIT License

Recipe:

/fast5seek/meta.yaml

package fast5seek

Versions:

0.1.1-1,  0.1.1-0,  0.1.0-1,  0.1.0-0

Depends:

• ont-fast5-api

• pysam

• python >=3

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install fast5seek

and update with:

conda update fast5seek

or use the docker container:

docker pull quay.io/biocontainers/fast5seek:<tag>

(see fast5seek/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fast5seek/README.html)