recipe fastani

FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).

Homepage

https://github.com/ParBLiSS/FastANI

License

Apache / Apache-2.0

Recipe

/fastani/meta.yaml

package fastani

Versions

1.33-0,  1.32-0,  1.31-0,  1.3-0,  1.2-0,  1.1-1,  1.1-0

Depends

• gsl >=2.7,<2.8.0a0

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

• zlib >=1.2.11,<1.3.0a0

Required By

• parsnp

• motulizer

• pgcgap

• anvio

• coverm

• btyper3

• aniclustermap

• drep

• lorikeet-genome

• dfast_qc

• gtdbtk

• genometreetk

• galah

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install fastani

and update with:

conda update fastani

or use the docker container:

docker pull quay.io/biocontainers/fastani:<tag>

(see fastani/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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