recipe fastani

FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).

Homepage

https://github.com/ParBLiSS/FastANI

License

Apache / Apache-2.0

Recipe

/fastani/meta.yaml

package fastani

Versions

1.32-0,  1.31-0,  1.3-0,  1.2-0,  1.1-1,  1.1-0

Depends

• boost >=1.70.0,<1.70.1.0a0

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• zlib >=1.2.11,<1.3.0a0

Required By

• drep

• coverm

• genometreetk

• gtdbtk

• anvio

• dfast_qc

• pgcgap

• galah

• parsnp

• lorikeet-genome

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install fastani

and update with:

conda update fastani

or use the docker container:

docker pull quay.io/biocontainers/fastani:<tag>

(see fastani/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fastani/README.html)