recipe fastani

FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).

Homepage:

https://github.com/ParBLiSS/FastANI

License:

Apache / Apache-2.0

Recipe:

/fastani/meta.yaml

package fastani

Versions:

1.33-3,  1.33-2,  1.33-1,  1.33-0,  1.32-0,  1.31-0,  1.3-0,  1.2-0,  1.1-1, 

1.33-3,  1.33-2,  1.33-1,  1.33-0,  1.32-0,  1.31-0,  1.3-0,  1.2-0,  1.1-1,  1.1-0

Depends:

• gsl >=2.7,<2.8.0a0

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• zlib

Required By:

• pbptyper

• dfast_qc

• lorikeet-genome

• coverm

• anvio

• gtdbtk

• pgcgap

• genometreetk

• parsnp

• aniclustermap

• galah

• drep

• pantools

• motulizer

• homopolish

• beav

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install fastani

and update with:

conda update fastani

or use the docker container:

docker pull quay.io/biocontainers/fastani:<tag>

(see fastani/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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