recipe fgmp

FGMP: assessing fungal genome completeness and gene content.

Homepage

https://github.com/stajichlab/FGMP

License

MIT

Recipe

/fgmp/meta.yaml

Links

biotools: fgmp, doi: 10.1101/049619

package fgmp

Versions

1.0.3-1,  1.0.3-0,  1.0.1-0

Depends

• augustus >=3.2.3

• blast >=2.2.31

• emboss >=6.5.7

• exonerate >=2.2.0

• hmmer >=3.0

• perl >=5.26.2,<5.26.3.0a0

• perl-app-cpanminus

• perl-bioperl

• perl-ipc-run

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install fgmp

and update with:

conda update fgmp

or use the docker container:

docker pull quay.io/biocontainers/fgmp:<tag>

(see fgmp/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fgmp/README.html)