filtlong

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Filtlong is a tool for filtering long reads. It can take a set of long reads and produce a smaller, better subset. It uses both read length (longer is better) and read identity (higher is better) when choosing which reads pass the filter.

Home https://github.com/rrwick/Filtlong
Versions 0.1.0, 0.1.1
License GPL-3.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/filtlong

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install filtlong

and update with:

conda update filtlong

docker

A Docker container is available at https://quay.io/repository/biocontainers/filtlong.