recipe flams

Find Lysine Acylation & other Modification Sites

Homepage:

https://github.com/hannelorelongin/FLAMS

License:

MIT / MIT

Recipe:

/flams/meta.yaml

package flams

versions:

1.1.4-0,  1.1.3-0,  1.1.2-0,  1.1.0-0,  1.0.1-0,  0.0.8-0,  0.0.6-0

depends appdirs:

1.4.4

depends biopython:

1.81

depends blast:

2.13.0

depends certifi:

2023.5.7

depends charset-normalizer:

3.1.0

depends idna:

3.4

depends numpy:

1.24.3

depends pandas:

2.1.2

depends python:

>=3.10

depends python-dateutil:

2.8.2

depends pytz:

2023.3.post1

depends requests:

2.31.0

depends six:

1.16.0

depends tzdata:

2023c

depends urllib3:

2.0.2

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install flams

and update with::

   mamba update flams

To create a new environment, run:

mamba create --name myenvname flams

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/flams:<tag>

(see `flams/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/flams/README.html)