recipe fqtrim

fqtrim is a versatile stand-alone utility that can be used to trim adapters, poly-A tails, terminal unknown bases (Ns) and low quality 3' regions in reads from high-throughput next-generation sequencing machines.

Homepage

https://ccb.jhu.edu/software/fqtrim/

License

Artistic License 2.0

Recipe

/fqtrim/meta.yaml

package fqtrim

(downloads) docker_fqtrim

Versions

0.9.7-10.9.7-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install fqtrim

and update with:

conda update fqtrim

or use the docker container:

docker pull quay.io/biocontainers/fqtrim:<tag>

(see fqtrim/tags for valid values for <tag>)