- recipe fsm-lite
Frequency-based String Mining (lite)
- Homepage:
- License:
GPL / GPL-3
- Recipe:
- Links:
doi: 10.1038/ncomms12797
A single-core implemetation of frequency-based substring mining. Used to count k-mers in populations of genomes (supplied as fasta files).
- package fsm-lite¶
-
- Versions:
1.0-5
,1.0-4
,1.0-3
,1.0-2
,1.0-1
,1.0-0
- Depends:
libgcc-ng
>=12
libstdcxx-ng
>=12
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install fsm-lite
and update with:
conda update fsm-lite
or use the docker container:
docker pull quay.io/biocontainers/fsm-lite:<tag>
(see fsm-lite/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/fsm-lite/README.html)