- recipe ganon
ganon classifies short DNA sequences against large sets of genomic reference sequences efficiently
- Homepage:
- License:
MIT / MIT License
- Recipe:
- Links:
doi: 10.1101/406017
ganon classifies short DNA sequences against large sets of genomic sequences efficiently, with download and update of references (RefSeq/Genbank), taxonomic (NCBI/GTDB) and hierarchical classification, customized reporting and more
- package ganon¶
-
- Versions:
1.2.0-0
,1.1.2-1
,1.1.2-0
,1.1.1-0
,1.1.0-0
,1.0.0-0
,0.4.1-0
,0.4.0-1
,0.4.0-0
,1.2.0-0
,1.1.2-1
,1.1.2-0
,1.1.1-0
,1.1.0-0
,1.0.0-0
,0.4.1-0
,0.4.0-1
,0.4.0-0
,0.3.4-0
,0.3.3-1
,0.3.3-0
,0.3.2-0
,0.3.1-0
,0.3.0-0
,0.2.3-0
,0.2.2-0
,0.2.1-0
,0.2.0-0
,0.1.5-1
,0.1.5-0
,0.1.4-0
,0.1.3-1
,0.1.3-0
,0.1.2-0
- Depends:
bzip2
>=1.0.8,<2.0a0
genome_updater
0.5.1
libgcc-ng
>=12
libstdcxx-ng
>=12
libzlib
>=1.2.12,<1.3.0a0
multitax
1.1.1
pandas
>=1.1.0
python
>=3.6,<3.7.0a0
python_abi
3.6.* *_cp36m
zlib
>=1.2.12,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install ganon
and update with:
conda update ganon
or use the docker container:
docker pull quay.io/biocontainers/ganon:<tag>
(see ganon/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/ganon/README.html)