- recipe gatk4
Genome Analysis Toolkit (GATK4)
- Homepage:
- Developer docs:
- License:
BSD / BSD-3-Clause
- Recipe:
- package gatk4¶
-
- Versions:
4.3.0.0-0
,4.2.6.1-1
,4.2.6.1-0
,4.2.6.0-0
,4.2.5.0-0
,4.2.4.1-0
,4.2.4.0-0
,4.2.3.0-1
,4.2.3.0-0
,4.3.0.0-0
,4.2.6.1-1
,4.2.6.1-0
,4.2.6.0-0
,4.2.5.0-0
,4.2.4.1-0
,4.2.4.0-0
,4.2.3.0-1
,4.2.3.0-0
,4.2.2.0-1
,4.2.2.0-0
,4.2.1.0-0
,4.2.0.0-1
,4.2.0.0-0
,4.1.9.0-0
,4.1.8.1-0
,4.1.8.0-0
,4.1.7.0-0
,4.1.6.0-0
,4.1.5.0-1
,4.1.5.0-0
,4.1.4.1-1
,4.1.4.1-0
,4.1.4.0-1
,4.1.4.0-0
,4.1.3.0-0
,4.1.2.0-1
,4.1.2.0-0
,4.1.1.0-0
,4.1.0.0-0
,4.0.12.0-0
,4.0.11.0-0
,4.0.10.0-0
,4.0.9.0-0
,4.0.8.1-0
,4.0.7.0-0
,4.0.6.0-0
,4.0.5.2-0
,4.0.5.1-0
,4.0.4.0-0
,4.0.3.0-1
,4.0.3.0-0
,4.0.2.1-0
,4.0.2.0-0
,4.0.1.2-0
,4.0.1.1-0
,4.0.1.0-0
,4.0.0.0-0
,4.0b6-0
,4.0b5-0
,4.0b4-0
,4.0b3-0
,4.0b2-0
,4.0b1-0
,4.0a1.2.7.2-2
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install gatk4
and update with:
conda update gatk4
or use the docker container:
docker pull quay.io/biocontainers/gatk4:<tag>
(see gatk4/tags for valid values for
<tag>
)
- package gatk4-spark¶
-
- Versions:
4.3.0.0-0
,4.2.6.1-1
,4.2.6.1-0
,4.2.6.0-0
,4.2.5.0-0
,4.2.4.1-0
,4.2.4.0-0
,4.2.3.0-1
,4.2.3.0-0
,4.3.0.0-0
,4.2.6.1-1
,4.2.6.1-0
,4.2.6.0-0
,4.2.5.0-0
,4.2.4.1-0
,4.2.4.0-0
,4.2.3.0-1
,4.2.3.0-0
,4.2.2.0-1
,4.2.2.0-0
,4.2.1.0-0
,4.2.0.0-1
,4.2.0.0-0
,4.1.9.0-0
,4.1.8.1-0
,4.1.8.0-0
,4.1.7.0-0
,4.1.6.0-0
,4.1.5.0-1
,4.1.5.0-0
,4.1.4.1-1
,4.1.4.1-0
,4.1.4.0-1
,4.1.4.0-0
,4.1.3.0-0
,4.1.2.0-1
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install gatk4-spark
and update with:
conda update gatk4-spark
or use the docker container:
docker pull quay.io/biocontainers/gatk4-spark:<tag>
(see gatk4-spark/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/gatk4/README.html)