recipe geneimpacts

prioritize effects of variant annotations from VEP, SnpEff, et al.

Homepage

https://github.com/brentp/geneimpacts

License

MIT

Recipe

/geneimpacts/meta.yaml

package geneimpacts

Versions

0.3.7-2,  0.3.7-1,  0.3.7-0,  0.3.6-4,  0.3.6-3,  0.3.6-2,  0.3.6-0,  0.3.5-0,  0.3.4-0, 

0.3.7-2,  0.3.7-1,  0.3.7-0,  0.3.6-4,  0.3.6-3,  0.3.6-2,  0.3.6-0,  0.3.5-0,  0.3.4-0,  0.3.3-0,  0.3.1-0,  0.3.0a0-0,  0.2.0-1,  0.1.4-1,  0.1.4-0,  0.1.3-0,  0.1.2-0,  0.1.1-0,  0.1.0-0,  0.0.9-0,  0.0.8-0,  0.0.7-0,  0.0.5-0,  0.0.4-0

Depends

• python

Required By

• vcf2db

• gemini

• bcbio-nextgen

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install geneimpacts

and update with:

conda update geneimpacts

or use the docker container:

docker pull quay.io/biocontainers/geneimpacts:<tag>

(see geneimpacts/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/geneimpacts/README.html)