genepender

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Annotates overlapping BED-defined regions to variants in a VCF file. Used primarily for providing a gene/exon context to variants (see:bedtarget).

Home https://github.com/BioTools-Tek/genepender
Versions v2.6
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/genepender

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install genepender

and update with:

conda update genepender

docker

A Docker container is available at https://quay.io/repository/biocontainers/genepender.