recipe genomicconsensus

PacBio genomic consensus and variant caller for RSII and Sequel

Homepage

https://github.com/PacificBiosciences/pbbioconda

License

BSD-3-Clause-Clear

Recipe

/genomicconsensus/meta.yaml

package genomicconsensus

(downloads) docker_genomicconsensus

Versions

2.3.3-0, 2.3.2-3, 2.3.2-2, 2.3.2-1, 2.3.2-0, 2.3.1-0

Depends numpy

>=1.16.2

Depends pbcommand

>=1.1.1

Depends pbcore

>=1.6.5

Depends python

>=2.7,<2.8.0a0

Depends python-consensuscore

>=1.1.1

Depends python-consensuscore2

>=3.4.1

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install genomicconsensus

and update with:

conda update genomicconsensus

or use the docker container:

docker pull quay.io/biocontainers/genomicconsensus:<tag>

(see genomicconsensus/tags for valid values for <tag>)