recipe get_homologues

A versatile software package for pan-genome analysis, including GET_HOMOLOGUES and GET_HOMOLOGUES-EST

Homepage:

https://github.com/eead-csic-compbio/get_homologues

License:

GPL3

Recipe:

/get_homologues/meta.yaml

Links:

biotools: get_homologues, doi: https://doi.org/10.1128/AEM.02411-13, doi: https://doi.org/10.3389/fpls.2017.00184, doi: https://doi.org/10.1007/978-1-4939-1720-4_14, doi: https://doi.org/10.1007/978-1-0716-2429-6_9

package get_homologues

Versions:

3.5.4-0,  3.5.1-0

Depends:

• blast

• cogtriangles

• diamond

• hmmer

• mcl

• perl

• perl-gd

• phylip

• r-ape

• r-base

• r-dendextend

• r-factoextra

• r-gplots

• wget

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install get_homologues

and update with:

conda update get_homologues

or use the docker container:

docker pull quay.io/biocontainers/get_homologues:<tag>

(see get_homologues/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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