recipe gffmunger

Munges GFF3 files exported from Chado database to make them suitable for loading into WebApollo

Homepage

https://github.com/sanger-pathogens/gffmunger

License

GPL / GPL-3.0

Recipe

/gffmunger/meta.yaml

package gffmunger

(downloads) docker_gffmunger

Versions

0.0.1-2, 0.0.1-1, 0.0.1-0

Depends biopython

>=1.68

Depends genometools-genometools

Depends gffutils

Depends python

>=3.6

Depends pyyaml

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install gffmunger

and update with:

conda update gffmunger

or use the docker container:

docker pull quay.io/biocontainers/gffmunger:<tag>

(see gffmunger/tags for valid values for <tag>)