recipe ghostx

GHOSTX is a homology search tool which can detect remote homologues like BLAST and is about 100 times more efficient than BLAST by using suffix arrays. GHOSTX outputs search results in the format similar to BLAST-tabular format.

Homepage

http://www.bi.cs.titech.ac.jp/ghostx/

License

BSD-2-Clause

Recipe

/ghostx/meta.yaml

package ghostx

(downloads) docker_ghostx

Versions

1.3.7-1, 1.3.7-0

Depends libgcc-ng

>=4.9

Depends libstdcxx-ng

>=4.9

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ghostx

and update with:

conda update ghostx

or use the docker container:

docker pull quay.io/biocontainers/ghostx:<tag>

(see ghostx/tags for valid values for <tag>)