ghostx

downloads

GHOSTX is a homology search tool which can detect remote homologues like BLAST and is about 100 times more efficient than BLAST by using suffix arrays. GHOSTX outputs search results in the format similar to BLAST-tabular format.

Home http://www.bi.cs.titech.ac.jp/ghostx/
Versions 1.3.7
License BSD-2-Clause
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/ghostx

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ghostx

and update with:

conda update ghostx

docker

A Docker container is available at https://quay.io/repository/biocontainers/ghostx.