recipe glimmerhmm

GlimmerHMM is a gene finder based on a Generalized Hidden Markov Model (GHMM)

Homepage

https://ccb.jhu.edu/software/glimmerhmm/

License

Artistic License

Recipe

/glimmerhmm/meta.yaml

package glimmerhmm

Versions

3.0.4-3,  3.0.4-2,  3.0.4-1,  3.0.4-0

Depends

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• perl >=5.26.2,<5.26.3.0a0

Required By

• quast

• funannotate

• antismash

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install glimmerhmm

and update with:

conda update glimmerhmm

or use the docker container:

docker pull quay.io/biocontainers/glimmerhmm:<tag>

(see glimmerhmm/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/glimmerhmm/README.html)