recipe glimmerhmm

GlimmerHMM is a gene finder based on a Generalized Hidden Markov Model (GHMM)

Homepage:

https://ccb.jhu.edu/software/glimmerhmm/

License:

Artistic License

Recipe:

/glimmerhmm/meta.yaml

package glimmerhmm

Versions:

3.0.4-3,  3.0.4-2,  3.0.4-1,  3.0.4-0

Depends:

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• perl >=5.26.2,<5.26.3.0a0

Required By:

• funannotate

• quast

• antismash

• antismash-lite

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install glimmerhmm

and update with:

conda update glimmerhmm

or use the docker container:

docker pull quay.io/biocontainers/glimmerhmm:<tag>

(see glimmerhmm/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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