recipe gnu-getopt

Command-line option parsing library

Homepage:

http://software.frodo.looijaard.name/getopt/

License:

GPLv2

Recipe:

/gnu-getopt/meta.yaml

package gnu-getopt

(downloads) docker_gnu-getopt

versions:

1.1.6-4,  1.1.6-3,  1.1.6-2,  1.1.6-1

depends gettext:

depends libgcc:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install gnu-getopt

and update with::

   mamba update gnu-getopt

To create a new environment, run:

mamba create --name myenvname gnu-getopt

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/gnu-getopt:<tag>

(see `gnu-getopt/tags`_ for valid values for ``<tag>``)

Notes

On Linux systems gnu-getopt is simply called 'getopt', however due to potential collision with the native BSD getopt on OSX, this binary is renamed 'gnu-getopt'.

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