recipe go-figure

GO-Figure! offers a simple solution for command-line plotting of informative summary visualisations of lists of GO terms, designed to support exploratory data analyses and multiple dataset comparisons.

Homepage:

https://gitlab.com/evogenlab/GO-Figure

License:

GPL3 / GPL-3.0-or-later

Recipe:

/go-figure/meta.yaml

GO-Figure! offers a simple solution for command-line plotting of informative summary visualisations of lists of GO terms, designed to support exploratory data analyses and multiple dataset comparisons.

package go-figure

versions:

1.0.2-0

depends adjusttext:

0.7.3.1.*

depends matplotlib-base:

3.7.1.*

depends python:

>=3

depends scikit-learn:

1.2.2.*

depends seaborn:

0.12.2.*

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install go-figure

and update with::

   mamba update go-figure

To create a new environment, run:

mamba create --name myenvname go-figure

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/go-figure:<tag>

(see `go-figure/tags`_ for valid values for ``<tag>``)

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