recipe goldrush

Linear-time de novo long read assembler, from the Bioinformatics Technology Lab

Homepage:

https://github.com/bcgsc/goldrush

License:

GPL-3.0

Recipe:

/goldrush/meta.yaml

package goldrush

Versions:

1.0.2-0,  1.0.1-0,  1.0.0-0,  0.9.3-0

Depends:

• _openmp_mutex >=4.5

• btllib

• gperftools

• libdivsufsort >=2.0.2,<2.1.0a0

• libgcc-ng >=12

• libstdcxx-ng >=12

• make

• minimap2

• ntlink >=1.3.0

• python >=3.8,<3.9.0a0

• python_abi 3.8.* *_cp38

• tigmint

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install goldrush

and update with:

conda update goldrush

or use the docker container:

docker pull quay.io/biocontainers/goldrush:<tag>

(see goldrush/tags for valid values for <tag>)

Download stats

Link to this page

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