recipe grafimo

GRAFIMO, GRAph-based Finding of Indivividual Motif Occurrences

Homepage

https://github.com/pinellolab/GRAFIMO

License

MIT

Recipe

/grafimo/meta.yaml

package grafimo

Versions

1.1.4-0,  1.1.3-1,  1.1.3-0,  1.1.1-0,  1.0.1-0

Depends

• colorama

• graphviz >=2.40.1,<3.0a0

• htslib

• libgcc-ng >=9.3.0

• numba >=0.47,<1

• numpy >=1.16,<1.17

• pandas >=0.24.2,<0.25

• python >=3.8,<3.9.0a0

• python_abi 3.8.* *_cp38

• statsmodels >=0.10.0,<0.11

• vg

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install grafimo

and update with:

conda update grafimo

or use the docker container:

docker pull quay.io/biocontainers/grafimo:<tag>

(see grafimo/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/grafimo/README.html)