recipe grafimo

GRAFIMO, GRAph-based Finding of Indivividual Motif Occurrences

Homepage:

https://github.com/pinellolab/GRAFIMO

License:

MIT

Recipe:

/grafimo/meta.yaml

package grafimo

Versions:

1.1.4-2,  1.1.4-1,  1.1.4-0,  1.1.3-1,  1.1.3-0,  1.1.1-0,  1.0.1-0

Depends:

• colorama

• graphviz

• htslib

• libgcc-ng >=10.3.0

• numba >=0.47,<1

• numpy >=1.17.5,<2.0a0

• pandas >=1.3.1,<2.0a0

• python >=3.7,<3.8.0a0

• python_abi 3.7.* *_cp37m

• statsmodels >=0.11

• vg

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install grafimo

and update with:

conda update grafimo

or use the docker container:

docker pull quay.io/biocontainers/grafimo:<tag>

(see grafimo/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/grafimo/README.html)