recipe grapetree

Web interface of GrapeTree, which is a program for phylogenetic analysis.

Homepage:

https://github.com/achtman-lab/GrapeTree

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/grapetree/meta.yaml

package grapetree

versions:

2.1-0

depends ete3:

depends flask:

depends networkx:

depends numba:

depends numpy:

depends pandas:

depends psutil:

depends python:

depends requests:

depends unidecode:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install grapetree

and update with::

   mamba update grapetree

To create a new environment, run:

mamba create --name myenvname grapetree

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/grapetree:<tag>

(see `grapetree/tags`_ for valid values for ``<tag>``)

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