recipe gs-tama

Gene-Switch Transcriptome Annotation by Modular Algorithms

Homepage:

https://github.com/sguizard/gs-tama

License:

GPL-3.0 License

Recipe:

/gs-tama/meta.yaml

package gs-tama

Versions:

1.0.3-0,  1.0.2-0,  1.0.1-0,  1.0-0

Depends:

• bedtools >=2.30.0

• biopython >=1.76

• blast >=2.11.0

• pysam >=0.16.0.1

• python 2.7.*

• samtools >=1.12

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install gs-tama

and update with:

conda update gs-tama

or use the docker container:

docker pull quay.io/biocontainers/gs-tama:<tag>

(see gs-tama/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/gs-tama/README.html)