recipe hicap

In silico typing of the H. influenzae capsule locus

Homepage

https://github.com/scwatts/hicap

License

GPL / GPL-3.0

Recipe

/hicap/meta.yaml

Links

doi: 10.1128/JCM.00190-19

package hicap

Versions

1.0.3-0,  1.0.2-0,  1.0.1-0,  1.0.0-0

Depends

• biopython 1.72

• blast >=2.2.28

• prodigal >=2.6.1

• python >=3.6

• reportlab 3.4.0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hicap

and update with:

conda update hicap

or use the docker container:

docker pull quay.io/biocontainers/hicap:<tag>

(see hicap/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hicap/README.html)