recipe hits

utilities for processing high-throughput sequencing experiments

Homepage:

https://github.com/jeffhussmann/hits

License:

GPLv3

Recipe:

/hits/meta.yaml

package hits

Versions:

0.3.3-1,  0.3.3-0,  0.3.2-0,  0.3.0-0,  0.1-2,  0.1-1,  0.1-0,  0.0.7-0

Depends:

• biopython 1.78

• bokeh 2.4.2

• ipython 7.30.1

• ipywidgets 7.5.1

• libgcc-ng >=10.3.0

• matplotlib-base 3.3.3

• numpy 1.21.4

• pandas 1.1.2

• pillow 7.2.0

• pysam >=0.15

• python >=3.7,<3.8.0a0

• python_abi 3.7.* *_cp37m

• pyyaml 5.3

• scipy 1.5.2

• seaborn 0.11.0

Required By:

• knock-knock

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install hits

and update with:

conda update hits

or use the docker container:

docker pull quay.io/biocontainers/hits:<tag>

(see hits/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hits/README.html)