recipe hits

utilities for processing high-throughput sequencing experiments

Homepage

https://github.com/jeffhussmann/hits

License

GPLv3

Recipe

/hits/meta.yaml

package hits

Versions

0.1-1,  0.1-0,  0.0.7-0

Depends

• biopython >=1.72

• bokeh >=1.0.4

• ipython >=7.8.0

• ipywidgets >=7.4.2

• libgcc-ng >=7.5.0

• matplotlib >=3.0.2

• numpy >=1.15.4

• pandas >=0.23.4

• pillow >=5.3.0

• pysam >=0.15.1

• python >=3.6,<3.7.0a0

• python_abi 3.6.* *_cp36m

• pyyaml >=3.13

• scipy >=1.2.1

Required By

• knock-knock

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hits

and update with:

conda update hits

or use the docker container:

docker pull quay.io/biocontainers/hits:<tag>

(see hits/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hits/README.html)