hlaprofiler

downloads

HLAProfiler uses k-mer profiles to predict HLA types from paired-end RNA-seq data.

Home https://github.com/ExpressionAnalysis/HLAProfiler
Versions 1.0.1, 1.0.2, 1.0.3, 1.0.4, 1.0.5
License Custom non-commercial license
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/hlaprofiler

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hlaprofiler

and update with:

conda update hlaprofiler

docker

A Docker container is available at https://quay.io/repository/biocontainers/hlaprofiler.