recipe hmftools-purple

Purity/ploidy estimator. Leverages the read depth and tumor BAF to estimate the purity of a sample and generate a copy number profile

Homepage:

https://github.com/hartwigmedical/hmftools/tree/master/purity-ploidy-estimator

License:

MIT / MIT

Recipe:

/hmftools-purple/meta.yaml

package hmftools-purple

(downloads) docker_hmftools-purple

Versions:
3.6-03.5-03.4-03.2-03.1-02.54-02.53-12.53-02.52-0

3.6-03.5-03.4-03.2-03.1-02.54-02.53-12.53-02.52-02.51-12.51-02.50-02.48-02.47-12.47-02.46-02.45-02.44-02.43-02.41-02.40-02.39-02.38-02.37-02.36-02.35-02.34-02.32-02.31-02.25-12.17-12.16-12.16-02.15-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install hmftools-purple

and update with:

conda update hmftools-purple

or use the docker container:

docker pull quay.io/biocontainers/hmftools-purple:<tag>

(see hmftools-purple/tags for valid values for <tag>)

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