recipe hmftools-purple

Purity/ploidy estimator. Leverages the read depth and tumor BAF to estimate the purity of a sample and generate a copy number profile

Homepage

https://github.com/hartwigmedical/hmftools/tree/master/purity-ploidy-estimator

License

MIT / MIT

Recipe

/hmftools-purple/meta.yaml

package hmftools-purple

(downloads) docker_hmftools-purple

Versions
2.45-02.44-02.43-02.41-02.40-02.39-02.38-02.37-02.36-0

2.45-02.44-02.43-02.41-02.40-02.39-02.38-02.37-02.36-02.35-02.34-02.32-02.31-02.25-12.17-12.16-12.16-02.15-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hmftools-purple

and update with:

conda update hmftools-purple

or use the docker container:

docker pull quay.io/biocontainers/hmftools-purple:<tag>

(see hmftools-purple/tags for valid values for <tag>)