recipe hmmer

Biosequence analysis using profile hidden Markov models

Homepage

http://hmmer.org/

License

BSD

Recipe

/hmmer/meta.yaml

package hmmer

Versions

3.2.1-1, 3.2.1-0, 3.2-3, 3.2-2, 3.2-0, 3.1b2-3, 3.1b2-2, 3.1b2-1, 3.1b2-0, 2.3.2-3, 2.3.2-2, 2.3.2-1, 2.3.2-0

Depends

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

Required By

• metaxa

• pipits

• magpurify

• thapbi-pict

• prokka

• busco

• antismash

• megagta

• islandpath

• trinotate

• ncbi-amrfinderplus

• metawatt

• dfast

• itsx

• anvio

• fgmp

• plant_tribes_assembly_post_processor

• repeatmasker

• pfam_scan

• gtdbtk

• perl-bio-automatedannotation

• barrnap

• plant_tribes_gene_family_classifier

• deltabs

• fargene

• itsxpress

• dammit

• deepbgc

• mitos

• pipelign

• checkm-genome

• dfam

• maxbin2

• picrust2

• platon

• ncbi-amr

• sepp

• eggnog-mapper

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hmmer

and update with:

conda update hmmer

or use the docker container:

docker pull quay.io/biocontainers/hmmer:<tag>

(see hmmer/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hmmer/README.html)