recipe hybran

Hybrid reference transfer and ab initio prokaryotic genome annotation

Homepage:

https://lpcdrp.gitlab.io/hybran

Developer docs:

https://gitlab.com/LPCDRP/hybran

License:

GPLv3

Recipe:

/hybran/meta.yaml

package hybran

Versions:

1.6.1-0,  1.6-0,  1.5.2-1,  1.5.2-0

Depends:

• biopython >=1.80

• blast

• cd-hit

• diamond

• dill

• eggnog-mapper

• emboss

• entrez-direct

• mcl

• multiprocess

• prokka >=1.14

• python >=3.9

• ratt

• tbl2asn-forever

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install hybran

and update with:

conda update hybran

or use the docker container:

docker pull quay.io/biocontainers/hybran:<tag>

(see hybran/tags for valid values for <tag>)

Download stats

Link to this page

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