recipe infernal

Infernal is for searching DNA sequence databases for RNA structure and sequence similarities.

Homepage

http://eddylab.org/infernal

License

BSD-3-Clause

Recipe

/infernal/meta.yaml

Infernal ("INFERence of RNA ALignment") is for searching DNA sequence databases for RNA structure and sequence similarities.

package infernal

Versions

1.1.4-1,  1.1.4-0,  1.1.3-1,  1.1.3-0,  1.1.2-3,  1.1.2-2,  1.1.2-1,  1.1.2-0,  1.1.1-0, 

1.1.4-1,  1.1.4-0,  1.1.3-1,  1.1.3-0,  1.1.2-3,  1.1.2-2,  1.1.2-1,  1.1.2-0,  1.1.1-0,  1.0.2-0

Depends

• libgcc-ng >=10.3.0

• perl >=5.32.1,<5.33.0a0 *_perl5

Required By

• genometreetk

• lotus2

• platon

• integron_finder

• ppanggolin

• trnascan-se

• tbox-scan

• mitoz

• vadr

• rnalien

• mitos

• dammit

• mirmachine

• mimseq

• snostrip

• bakta

• mirnature

• reago

• prokka

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install infernal

and update with:

conda update infernal

or use the docker container:

docker pull quay.io/biocontainers/infernal:<tag>

(see infernal/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/infernal/README.html)