recipe infernal

Infernal is for searching DNA sequence databases for RNA structure and sequence similarities.

Homepage:

http://eddylab.org/infernal

License:

BSD-3-Clause

Recipe:

/infernal/meta.yaml

Infernal ("INFERence of RNA ALignment") is for searching DNA sequence databases for RNA structure and sequence similarities.

package infernal

Versions:

1.1.4-1,  1.1.4-0,  1.1.3-1,  1.1.3-0,  1.1.2-3,  1.1.2-2,  1.1.2-1,  1.1.2-0,  1.1.1-0, 

1.1.4-1,  1.1.4-0,  1.1.3-1,  1.1.3-0,  1.1.2-3,  1.1.2-2,  1.1.2-1,  1.1.2-0,  1.1.1-0,  1.0.2-0

Depends:

• libgcc-ng >=10.3.0

• perl >=5.32.1,<5.33.0a0 *_perl5

Required By:

• tbox-scan

• platon

• trnascan-se

• genometreetk

• reago

• snostrip

• rnalien

• mimseq

• mirmachine

• dammit

• mitos

• bakta

• lotus2

• mirnature

• integron_finder

• mitoz

• stag

• ppanggolin

• vadr

• prokka

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install infernal

and update with:

conda update infernal

or use the docker container:

docker pull quay.io/biocontainers/infernal:<tag>

(see infernal/tags for valid values for <tag>)

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Link to this page

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