recipe inforna

A server for the design of RNA sequences that fold into a given pseudo-knot free RNA secondary structure.

Homepage:

https://github.com/BackofenLab/INFO-RNA

License:

MIT-like

Recipe:

/inforna/meta.yaml

Links:

biotools: inforna

package inforna

(downloads) docker_inforna

versions:

2.1.2-6,  2.1.2-5,  2.1.2-4,  2.1.2-3,  2.1.2-2,  2.1.2-0

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

depends viennarna:

>=2.5.1,<2.6.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install inforna

and update with::

   mamba update inforna

To create a new environment, run:

mamba create --name myenvname inforna

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/inforna:<tag>

(see `inforna/tags`_ for valid values for ``<tag>``)

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Render an install-with-bioconda badge with the following MarkDown:

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