recipe intermine

InterMine WebService client



LGPL / GNU Library or Lesser General Public License (LGPL) or BSD License



InterMine Webservice Client:A Python API to access bioinformatics data warehouses powered by the InterMine platform.

package intermine

(downloads) docker_intermine



depends lxml:

depends python:

depends requests:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install intermine

and update with::

   mamba update intermine

To create a new environment, run:

mamba create --name myenvname intermine

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `intermine/tags`_ for valid values for ``<tag>``)

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