recipe iva

Iterative Virus Assembler

Homepage:

https://github.com/sanger-pathogens/iva

License:

GPL / GPLv3

Recipe:

/iva/meta.yaml

package iva

Versions:

1.0.11-0,  1.0.9-2,  1.0.9-1,  1.0.9-0,  1.0.7-0,  1.0.6-0

Depends:

• kmc

• mummer

• networkx >=1.7

• packaging

• pyfastaq >=3.10.0

• pysam >=0.8.1

• python >=3

• samtools

• smalt

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install iva

and update with:

conda update iva

or use the docker container:

docker pull quay.io/biocontainers/iva:<tag>

(see iva/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/iva/README.html)