recipe jali

Alignment method for comparing a protein sequence to a protein family, represented by a multiple alignment. It can also be used for sensitive protein database searches. The algorithm is a generalization of the Smith-Waterman algorithm.

Homepage

http://bibiserv.cebitec.uni-bielefeld.de/jali

License

file

Recipe

/jali/meta.yaml

Links

biotools: jali, doi: 10.1089/106652702761034172

package jali

(downloads) docker_jali

Versions

1.3-1, 1.3-0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install jali

and update with:

conda update jali

or use the docker container:

docker pull quay.io/biocontainers/jali:<tag>

(see jali/tags for valid values for <tag>)