recipe jamm

JAMM is a peak finder for NGS datasets (ChIP-Seq, ATAC-Seq, DNase-Seq..etc.) that can integrate replicates and assign peak boundaries accurately.

Homepage

https://github.com/mahmoudibrahim/JAMM

License

GPL

Recipe

/jamm/meta.yaml

package jamm

(downloads) docker_jamm

Versions
1.0.8.0-01.0.7.6-01.0.7.5-21.0.7.5-11.0.7.5-01.0.7.4-01.0.7.2-31.0.7.2-21.0.7.2-1

1.0.8.0-01.0.7.6-01.0.7.5-21.0.7.5-11.0.7.5-01.0.7.4-01.0.7.2-31.0.7.2-21.0.7.2-11.0.7.2-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install jamm

and update with:

conda update jamm

or use the docker container:

docker pull quay.io/biocontainers/jamm:<tag>

(see jamm/tags for valid values for <tag>)