recipe jbrowse

The JBrowse Genome Browser

Homepage:

https://jbrowse.org/

License:

LGPL

Recipe:

/jbrowse/meta.yaml

Links:

biotools: jbrowse, doi: 10.1101/gr.094607.109

package jbrowse

Versions:

1.16.11-6,  1.16.11-5,  1.16.11-4,  1.16.11-3,  1.16.11-2,  1.16.11-1,  1.16.11-0,  1.16.10-0,  1.16.9-0, 

1.16.11-6,  1.16.11-5,  1.16.11-4,  1.16.11-3,  1.16.11-2,  1.16.11-1,  1.16.11-0,  1.16.10-0,  1.16.9-0,  1.16.8-0,  1.16.6-1,  1.16.6-0,  1.16.5-0,  1.16.4-0,  1.16.2-7,  1.16.2-6,  1.16.2-5,  1.16.2-4,  1.16.1-4,  1.16.1-3,  1.16.1-2,  1.16.1-1,  1.16.1-0,  1.15.4-0,  1.15.1-0,  1.15.0-0,  1.12.5-2,  1.12.5-0,  1.12.3-0,  1.12.1-3,  1.12.1-2,  1.12.1-1,  1.12.1-0

Depends:

• gff3sort

• libcxx >=15.0.7

• nodejs >=15.14.0,<16.0a0

• perl >=5.32.1,<5.33.0a0 *_perl5

• perl-bio-featureio

• perl-bio-gff3

• perl-bioperl

• perl-capture-tiny

• perl-db-file

• perl-devel-size

• perl-digest-crc32

• perl-exporter-tiny

• perl-file-copy-recursive

• perl-file-next

• perl-hash-merge

• perl-heap-simple

• perl-io-uncompress-gunzip

• perl-json

• perl-list-moreutils

• perl-local-lib

• perl-perlio-gzip

• perl-scalar-list-utils

• perl-test-deep

• perl-test-simple

• perl-test-warn

• perl-uri 5.17.*

• python_abi 2.7.* *_cp27m

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install jbrowse

and update with:

conda update jbrowse

or use the docker container:

docker pull quay.io/biocontainers/jbrowse:<tag>

(see jbrowse/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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