recipe kraken2

Kraken2 is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies.

Homepage:

https://ccb.jhu.edu/software/kraken2/

License:

GPLv3

Recipe:

/kraken2/meta.yaml

Links:

biotools: kraken2, doi: 10.1186/gb-2014-15-3-r46

package kraken2

(downloads) docker_kraken2

Versions:
2.1.2-22.1.2-12.1.2-02.1.1-12.1.1-02.1.0-02.0.9beta-02.0.8_beta-22.0.8_beta-1

2.1.2-22.1.2-12.1.2-02.1.1-12.1.1-02.1.0-02.0.9beta-02.0.8_beta-22.0.8_beta-12.0.8_beta-02.0.7_beta-32.0.7_beta-22.0.7_beta-12.0.7_beta-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install kraken2

and update with:

conda update kraken2

or use the docker container:

docker pull quay.io/biocontainers/kraken2:<tag>

(see kraken2/tags for valid values for <tag>)

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