- recipe kraken2
Kraken2 is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies.
- Homepage:
- License:
GPLv3
- Recipe:
- Links:
biotools: kraken2, doi: 10.1186/gb-2014-15-3-r46
- package kraken2¶
-
- Versions:
2.1.2-2
,2.1.2-1
,2.1.2-0
,2.1.1-1
,2.1.1-0
,2.1.0-0
,2.0.9beta-0
,2.0.8_beta-2
,2.0.8_beta-1
,2.1.2-2
,2.1.2-1
,2.1.2-0
,2.1.1-1
,2.1.1-0
,2.1.0-0
,2.0.9beta-0
,2.0.8_beta-2
,2.0.8_beta-1
,2.0.8_beta-0
,2.0.7_beta-3
,2.0.7_beta-2
,2.0.7_beta-1
,2.0.7_beta-0
- Depends:
_openmp_mutex
* *_gnu
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
perl
>=5.32.1,<5.33.0a0 *_perl5
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install kraken2
and update with:
conda update kraken2
or use the docker container:
docker pull quay.io/biocontainers/kraken2:<tag>
(see kraken2/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/kraken2/README.html)