recipe macrel

A pipeline for AMP (antimicrobial peptide) prediction

Homepage:

https://github.com/BigDataBiology/macrel

License:

MIT

Recipe:

/macrel/meta.yaml

Links:

doi: 10.7717/peerj.10555

Used for the prediction of AMPs in (meta)genomes.

package macrel

Versions:

1.2.0-0,  1.1.0-1,  1.1.0-0,  1.0.1-0,  1.0.0-1,  1.0.0-0,  0.6.1-0,  0.6.0-0,  0.5.0-2, 

1.2.0-0,  1.1.0-1,  1.1.0-0,  1.0.1-0,  1.0.0-1,  1.0.0-0,  0.6.1-0,  0.6.0-0,  0.5.0-2,  0.5.0-1,  0.5.0-0,  0.4.0-0,  0.3.1-1,  0.3.1-0,  0.2-0

Depends:

• atomicwrites

• megahit

• ngless

• paladin

• pandas

• pyrodigal

• python

• scikit-learn

• tzlocal

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install macrel

and update with:

conda update macrel

or use the docker container:

docker pull quay.io/biocontainers/macrel:<tag>

(see macrel/tags for valid values for <tag>)

Download stats

Link to this page

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