recipe malder

MALDER is a version of ALDER (http://groups.csail.mit.edu/cb/alder/) that has been modified to allow multiple admixture events.

Homepage:

https://github.com/joepickrell/malder

License:

Custom OSS

Recipe:

/malder/meta.yaml

Links:

doi: 10.1073/pnas.1313787111

package malder

versions:

1.0.1e83d4e-7,  1.0.1e83d4e-6,  1.0.1e83d4e-5,  1.0.1e83d4e-4,  1.0.1e83d4e-3,  1.0.1e83d4e-2,  1.0.1e83d4e-1,  1.0.1e83d4e-0

depends _openmp_mutex:

>=4.5

depends fftw:

>=3.3.10,<4.0a0

depends gsl:

>=2.7,<2.8.0a0

depends libblas:

>=3.9.0,<4.0a0

depends libcblas:

>=3.9.0,<4.0a0

depends libgcc-ng:

>=12

depends liblapack:

>=3.9.0,<4.0a0

depends liblapacke:

>=3.9.0,<4.0a0

depends libstdcxx-ng:

>=12

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install malder

and update with::

   mamba update malder

To create a new environment, run:

mamba create --name myenvname malder

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/malder:<tag>

(see `malder/tags`_ for valid values for ``<tag>``)

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