recipe mantis_pfa

Consensus-driven protein function annotation tool

Homepage:

https://github.com/PedroMTQ/Mantis

License:

MIT / MIT

Recipe:

/mantis_pfa/meta.yaml

Links:

biotools: mantis_pfa, doi: 10.1093/gigascience/giab042

Mantis is a fully customizable protein function annotation, that dynamically integrates multiple reference databases to produce consensus-driven annotations.

package mantis_pfa

Versions:

1.5.5-1,  1.5.5-0,  1.5.4-0,  1.5.3-0,  1.5.1-0,  1.5.0-1,  1.5.0-0,  1.4.9-1,  1.4.9-0, 

1.5.5-1,  1.5.5-0,  1.5.4-0,  1.5.3-0,  1.5.1-0,  1.5.0-1,  1.5.0-0,  1.4.9-1,  1.4.9-0,  1.4.8-1,  1.4.8-0,  1.4.7-1,  1.4.7-0,  1.4.5-0,  1.4.4-0,  1.4.3-0

Depends:

• cython

• diamond >=2.0.13

• hmmer >=3.2.1

• libgcc-ng >=12

• nltk >=3.6

• numpy

• psutil

• python >=3.10,<3.11.0a0

• python_abi 3.10.* *_cp310

• requests

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install mantis_pfa

and update with:

conda update mantis_pfa

or use the docker container:

docker pull quay.io/biocontainers/mantis_pfa:<tag>

(see mantis_pfa/tags for valid values for <tag>)

Download stats

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