recipe mercat2

versatile k-mer counter and diversity estimator for database independent property analysis (DIPA) for multi-omic analysis

Homepage:

https://github.com/raw-lab/mercat2

License:

BSD / BSD-3-Clause

Recipe:

/mercat2/meta.yaml

package mercat2

Versions:

1.0-0,  0.2-1,  0.2-0,  0.1-0

Depends:

• configargparse

• dominate

• fastp

• fastqc

• grpcio

• humanize

• metaomestats

• numpy

• pandas

• plotly

• prodigal

• psutil

• python <3.10

• python-kaleido

• ray-core

• ray-dashboard

• ray-default

• scikit-bio

• scikit-learn

• scipy 1.8.1

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install mercat2

and update with:

conda update mercat2

or use the docker container:

docker pull quay.io/biocontainers/mercat2:<tag>

(see mercat2/tags for valid values for <tag>)

Download stats

Link to this page

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