recipe metacerberus

Versatile Functional Ontology Assignments for Metagenomes via Hidden Markov Model (HMM) searching with environmental focus of shotgun meta'omics data

Homepage:

https://github.com/raw-lab/metacerberus

License:

BSD / BSD-3-Clause

Recipe:

/metacerberus/meta.yaml

package metacerberus

Versions:

1.0-0,  0.2-1,  0.2-0,  0.1-0

Depends:

• bbmap

• configargparse

• dominate

• fastp

• fastqc

• flash2

• gcc

• git

• gitpython

• grpcio

• hmmer

• make

• metaomestats

• numpy

• pandas

• plotly

• porechop

• prodigal

• psutil

• python

• python-kaleido

• ray-core

• ray-dashboard

• ray-default

• scikit-learn

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install metacerberus

and update with:

conda update metacerberus

or use the docker container:

docker pull quay.io/biocontainers/metacerberus:<tag>

(see metacerberus/tags for valid values for <tag>)

Download stats

Link to this page

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