recipe metavelvet-sl

MetaVelvet-SL : An extension of Velvet assembler to de novo metagenomic assembler utilizing supervised learning

Homepage

http://metavelvet.dna.bio.keio.ac.jp/MSL.html

License

Recipe

/metavelvet-sl/meta.yaml

package metavelvet-sl

Versions

1.0-3, 1.0-2, 1.0-1

Depends dwgsim

Depends libgcc

Depends libsvm

Depends metaphlan2

Depends metavelvet-sl-feature-extraction

Depends perl

5.22.0*

Depends perl-app-cpanminus

Depends perl-module-build

Depends velvet

Depends zlib

1.2.11*

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install metavelvet-sl

and update with:

conda update metavelvet-sl

or use the docker container:

docker pull quay.io/biocontainers/metavelvet-sl:<tag>

(see metavelvet-sl/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/metavelvet-sl/README.html)