recipe metavelvet-sl

MetaVelvet-SL : An extension of Velvet assembler to de novo metagenomic assembler utilizing supervised learning

Homepage

http://metavelvet.dna.bio.keio.ac.jp/MSL.html

License

Recipe

/metavelvet-sl/meta.yaml

package metavelvet-sl

Versions

1.0-3,  1.0-2,  1.0-1

Depends

• dwgsim

• libgcc

• libsvm

• metaphlan2

• metavelvet-sl-feature-extraction

• perl 5.22.0*

• perl-app-cpanminus

• perl-module-build

• velvet

• zlib 1.2.11*

Required By

• metavelvet-sl-pipeline

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install metavelvet-sl

and update with:

conda update metavelvet-sl

or use the docker container:

docker pull quay.io/biocontainers/metavelvet-sl:<tag>

(see metavelvet-sl/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/metavelvet-sl/README.html)