midas

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An integrated pipeline for estimating strain-level genomic variation from metagenomic data

Home https://github.com/snayfach/MIDAS
Versions 1.3.0, 1.3.1
License GPL-3.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/midas

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install midas

and update with:

conda update midas

docker

A Docker container is available at https://quay.io/repository/biocontainers/midas.