recipe miniasm

Ultrafast de novo assembly for long noisy reads (though having no consensus step)

Homepage:

https://github.com/lh3/miniasm

License:

MIT

Recipe:

/miniasm/meta.yaml

package miniasm

Versions:

0.3_r179-3,  0.3_r179-2,  0.3_r179-1,  0.3_r179-0,  0.2-0,  0.2_r168-3,  0.2_r168-2,  0.2_r168-1,  0.2_r168-0, 

0.3_r179-3,  0.3_r179-2,  0.3_r179-1,  0.3_r179-0,  0.2-0,  0.2_r168-3,  0.2_r168-2,  0.2_r168-1,  0.2_r168-0,  0.2_r159-0,  0.2_r137-0

Depends:

• libgcc-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

• zlib >=1.2.11,<1.3.0a0

Required By:

• unicycler

• pomoxis

• trycycler

• dragonflye

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install miniasm

and update with:

conda update miniasm

or use the docker container:

docker pull quay.io/biocontainers/miniasm:<tag>

(see miniasm/tags for valid values for <tag>)

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Link to this page

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