recipe minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences.

Homepage

https://github.com/lh3/minimap2

License

MIT

Recipe

/minimap2/meta.yaml

package minimap2

(downloads) docker_minimap2

Versions

2.17-0, 2.16-1, 2.16-0, 2.15-1, 2.15-0, 2.14-0, 2.13-0, 2.12-0, 2.11-0, 2.10-1, 2.9-1, 2.8-1, 2.8-0, 2.7-1, 2.7-0, 2.6.1-0, 2.6-0, 2.5-0, 2.4-0, 2.3-0, 2.1.1-0, 2.1.r311-0, 2.0.r191-0

Depends
  • libgcc-ng >=7.3.0

  • zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install minimap2

and update with:

conda update minimap2

or use the docker container:

docker pull quay.io/biocontainers/minimap2:<tag>

(see minimap2/tags for valid values for <tag>)