minimap2

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A versatile pairwise aligner for genomic and spliced nucleotide sequences.

Home https://github.com/lh3/minimap2
Versions 2.0.r191, 2.1.1, 2.1.r311, 2.10, 2.11, 2.12, 2.3, 2.4, 2.5, 2.6, 2.6.1, 2.7, 2.8, 2.9
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/minimap2

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install minimap2

and update with:

conda update minimap2

docker

A Docker container is available at https://quay.io/repository/biocontainers/minimap2.