recipe mirtop

Small RNA-seq annotation

Homepage:

http://github.com/mirtop/mirtop

License:

MIT / MIT License

Recipe:

/mirtop/meta.yaml

Links:

biotools: mirtop

package mirtop

Versions:

0.4.25-0,  0.4.24-0,  0.4.23-1,  0.4.23-0,  0.4.22-0,  0.4.21-0,  0.4.20-0,  0.4.19-0,  0.4.18a-2, 

0.4.25-0,  0.4.24-0,  0.4.23-1,  0.4.23-0,  0.4.22-0,  0.4.21-0,  0.4.20-0,  0.4.19-0,  0.4.18a-2,  0.4.18a-1,  0.4.18a-0,  0.4.17a-0,  0.4.15a-0,  0.3.17-1,  0.3.17-0,  0.3.11a0-2,  0.3.11a0-0,  0.3.6a0-0,  0.3.2a0-0,  0.1.8a0-0

Depends:

• biopython

• pandas

• pybedtools

• pysam

• python

Required By:

• seqcluster

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install mirtop

and update with:

conda update mirtop

or use the docker container:

docker pull quay.io/biocontainers/mirtop:<tag>

(see mirtop/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/mirtop/README.html)